Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.06□□□□□ -0.48
UPK2O00526 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.06□□□□□ -0.48
UPK2O00526 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.06□□□□□ -0.48
UPK2O00526 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.06□□□□□ -0.48
UPK2O00526 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.06□□□□□ -0.48
UPK2O00526 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.06□□□□□ -0.48
UPK2O00526 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK2O00526 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.06□□□□□ -0.48
UPK2O00526 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK2O00526 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
UPK2O00526 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK2O00526 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK2O00526 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK2O00526 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
UPK2O00526 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
UPK2O00526 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK2O00526 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.06□□□□□ -0.48
UPK2O00526 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
UPK2O00526 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
UPK2O00526 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.06□□□□□ -0.48
UPK2O00526 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UPK2O00526 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.05□□□□□ -0.48
UPK2O00526 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
UPK2O00526 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
UPK2O00526 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.05□□□□□ -0.48
UPK2O00526 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
UPK2O00526 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.05□□□□□ -0.48
UPK2O00526 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
UPK2O00526 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 GNAQP1-201ENST00000444815 1067 ntBASIC12.05□□□□□ -0.48
UPK2O00526 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 AC093004.1-201ENST00000508850 424 ntBASIC12.05□□□□□ -0.48
UPK2O00526 AC093214.1-201ENST00000511688 1107 ntBASIC12.05□□□□□ -0.48
UPK2O00526 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.05□□□□□ -0.48
UPK2O00526 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.05□□□□□ -0.48
UPK2O00526 AC055876.2-201ENST00000531834 546 ntBASIC12.05□□□□□ -0.48
UPK2O00526 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.05□□□□□ -0.48
UPK2O00526 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.05□□□□□ -0.48
UPK2O00526 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.05□□□□□ -0.48
UPK2O00526 AC099568.2-201ENST00000609194 695 ntBASIC12.05□□□□□ -0.48
UPK2O00526 AC106028.4-201ENST00000614509 607 ntBASIC12.05□□□□□ -0.48
UPK2O00526 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.05□□□□□ -0.48
UPK2O00526 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.05□□□□□ -0.48
UPK2O00526 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 AL603764.1-201ENST00000636452 321 ntBASIC12.05□□□□□ -0.48
UPK2O00526 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
UPK2O00526 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.05□□□□□ -0.48
UPK2O00526 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.05□□□□□ -0.48
UPK2O00526 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
UPK2O00526 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.05□□□□□ -0.48
UPK2O00526 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
UPK2O00526 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
UPK2O00526 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.05□□□□□ -0.48
UPK2O00526 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.05□□□□□ -0.48
UPK2O00526 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
UPK2O00526 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK2O00526 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
UPK2O00526 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.04□□□□□ -0.48
UPK2O00526 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK2O00526 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK2O00526 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.04□□□□□ -0.48
UPK2O00526 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK2O00526 KRT8P22-201ENST00000562317 1415 ntBASIC12.04□□□□□ -0.48
UPK2O00526 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK2O00526 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
UPK2O00526 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms