Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.37■□□□□ 0.21
CCDC66A2RUB6 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 AC004461.1-201ENST00000412461 403 ntBASIC16.36■□□□□ 0.21
CCDC66A2RUB6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 FAM8A3P-201ENST00000427218 844 ntBASIC16.36■□□□□ 0.21
CCDC66A2RUB6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 YBX1P5-201ENST00000509441 847 ntBASIC16.36■□□□□ 0.21
CCDC66A2RUB6 AC093520.2-201ENST00000561830 333 ntBASIC16.36■□□□□ 0.21
CCDC66A2RUB6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC66A2RUB6 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 GPS2P2-201ENST00000430745 888 ntBASIC16.35■□□□□ 0.21
CCDC66A2RUB6 RBPMS2P1-201ENST00000437762 623 ntBASIC16.35■□□□□ 0.21
CCDC66A2RUB6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 AC112482.1-201ENST00000492080 688 ntBASIC16.35■□□□□ 0.21
CCDC66A2RUB6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 AC139530.3-201ENST00000620344 690 ntBASIC16.35■□□□□ 0.21
CCDC66A2RUB6 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC66A2RUB6 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms