Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 INE2-201ENST00000630399 1874 ntBASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC092580.3-201ENST00000430932 139 ntBASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 DNAJB3-202ENST00000449667 1266 ntBASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 AL391069.4-201ENST00000609583 481 ntBASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 BTBD7P1-201ENST00000447253 1453 ntBASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 AL137783.1-201ENST00000623494 1896 ntBASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV6-7A0A0A0MS04 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC100757.3-201ENST00000622361 1406 ntBASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV6-7A0A0A0MS04 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms