Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AC007969.1-201ENST00000433675 447 ntBASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AC106820.3-201ENST00000561653 397 ntBASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AL008721.1-201ENST00000609964 604 ntBASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 RN7SKP230-201ENST00000365642 335 ntBASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 AP003171.2-201ENST00000528208 925 ntBASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 AC079316.1-201ENST00000548397 411 ntBASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 AC126755.1-201ENST00000525846 6405 ntBASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 AL138725.1-201ENST00000407347 1314 ntBASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGC4Q9Y5F7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 MTHFR-210ENST00000641407 2387 ntBASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGC4Q9Y5F7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms