Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 INTS4P2-202ENST00000614726 2019 ntBASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
RNF11Q9Y3C5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AC098850.1-201ENST00000419919 790 ntBASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AC104596.2-201ENST00000512793 793 ntBASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AC027796.2-201ENST00000575326 344 ntBASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 SPDYE22P-201ENST00000582158 798 ntBASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AC099568.2-201ENST00000609194 695 ntBASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF11Q9Y3C5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 AP001267.2-201ENST00000532619 2086 ntBASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RNF11Q9Y3C5 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms