Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 AC112492.5-201ENST00000421897 457 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 ATP5G2P4-201ENST00000442175 420 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 BCRP2-202ENST00000447763 634 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 AC022137.2-201ENST00000503482 481 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 BCRP6-201ENST00000510112 632 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 BCRP7-201ENST00000511549 544 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 IGHV3-71-201ENST00000523324 359 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 HILS1-202ENST00000545329 423 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 SAMD11P1-201ENST00000571429 661 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 RPSAP52-203ENST00000622976 1023 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 ZBED1P1-201ENST00000502364 1930 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 AC232323.1-201ENST00000540724 2099 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 REXO1L5P-201ENST00000622260 2098 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLN8Q9UBY8 AL122018.1-201ENST00000446607 2310 ntBASIC12.76□□□□□ -0.37
CLN8Q9UBY8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 AL645937.2-201ENST00000396808 931 ntBASIC12.75□□□□□ -0.37
CLN8Q9UBY8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.75□□□□□ -0.37
CLN8Q9UBY8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 ACA64.2-201ENST00000459014 129 ntBASIC12.75□□□□□ -0.37
CLN8Q9UBY8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 AP001889.1-201ENST00000525414 633 ntBASIC12.75□□□□□ -0.37
CLN8Q9UBY8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 AC012508.2-201ENST00000567613 1472 ntBASIC12.75□□□□□ -0.37
CLN8Q9UBY8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLN8Q9UBY8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLN8Q9UBY8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms