Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
POLR2J2Q9GZM3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 TREML5P-201ENST00000421694 576 ntBASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 AC026410.3-201ENST00000514280 936 ntBASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
POLR2J2Q9GZM3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 AC018529.2-202ENST00000611482 3087 ntBASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 DRD5P1-201ENST00000456605 1438 ntBASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 MIR1233-2-201ENST00000408138 82 ntBASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 MIR1233-1-201ENST00000408722 82 ntBASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 TSSK5P-201ENST00000423978 907 ntBASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 RARRES2P5-201ENST00000564013 466 ntBASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 SRD5A3P1-201ENST00000603021 949 ntBASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 AC093813.1-201ENST00000605066 256 ntBASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
POLR2J2Q9GZM3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms