Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 KRT8P35-201ENST00000483942 1338 ntBASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 FAM207CP-201ENST00000443486 507 ntBASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 MESTP3-201ENST00000503460 968 ntBASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 AL096865.1-201ENST00000606796 927 ntBASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 CU634019.7-201ENST00000624153 1185 ntBASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 FP236241.2-201ENST00000624906 1185 ntBASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.71□□□□□ -0.21
RSPO3Q9BXY4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
RSPO3Q9BXY4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RSPO3Q9BXY4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
RSPO3Q9BXY4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RSPO3Q9BXY4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
RSPO3Q9BXY4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RSPO3Q9BXY4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
RSPO3Q9BXY4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RSPO3Q9BXY4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.71□□□□□ -0.22
RSPO3Q9BXY4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.71□□□□□ -0.22
RSPO3Q9BXY4 AL136172.1-201ENST00000598590 1394 ntBASIC13.71□□□□□ -0.22
RSPO3Q9BXY4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 LRRC59-203ENST00000576448 1531 ntBASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 MRPL37P1-201ENST00000592451 1337 ntBASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 HSPA8P5-201ENST00000456928 2069 ntBASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 AP003171.2-201ENST00000528208 925 ntBASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 AC190387.1-201ENST00000551683 408 ntBASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 AC145423.3-201ENST00000615987 467 ntBASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RSPO3Q9BXY4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms