Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.64■□□□□ 0.09
SMOQ99835 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SMOQ99835 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.64■□□□□ 0.09
SMOQ99835 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.64■□□□□ 0.09
SMOQ99835 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.63■□□□□ 0.09
SMOQ99835 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 MTHFR-210ENST00000641407 2387 ntBASIC15.63■□□□□ 0.09
SMOQ99835 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.63■□□□□ 0.09
SMOQ99835 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.63■□□□□ 0.09
SMOQ99835 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SMOQ99835 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.63■□□□□ 0.09
SMOQ99835 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.63■□□□□ 0.09
SMOQ99835 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.63■□□□□ 0.09
SMOQ99835 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.63■□□□□ 0.09
SMOQ99835 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.63■□□□□ 0.09
SMOQ99835 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.63■□□□□ 0.09
SMOQ99835 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.63■□□□□ 0.09
SMOQ99835 CICP12-201ENST00000455801 843 ntBASIC15.63■□□□□ 0.09
SMOQ99835 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.63■□□□□ 0.09
SMOQ99835 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.63■□□□□ 0.09
SMOQ99835 DUX4L46-201ENST00000566845 751 ntBASIC15.63■□□□□ 0.09
SMOQ99835 MIR4525-201ENST00000580000 75 ntBASIC15.63■□□□□ 0.09
SMOQ99835 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.63■□□□□ 0.09
SMOQ99835 AC008825.2-201ENST00000603374 718 ntBASIC15.63■□□□□ 0.09
SMOQ99835 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SMOQ99835 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.63■□□□□ 0.09
SMOQ99835 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 AC092135.3-201ENST00000624151 1846 ntBASIC15.63■□□□□ 0.09
SMOQ99835 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 CICP24-201ENST00000605464 2705 ntBASIC15.63■□□□□ 0.09
SMOQ99835 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SMOQ99835 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SMOQ99835 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.63■□□□□ 0.09
SMOQ99835 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.62■□□□□ 0.09
SMOQ99835 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SMOQ99835 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.62■□□□□ 0.09
SMOQ99835 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.62■□□□□ 0.09
SMOQ99835 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SMOQ99835 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.62■□□□□ 0.09
SMOQ99835 POM121L10P-201ENST00000436994 1285 ntBASIC15.62■□□□□ 0.09
SMOQ99835 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.62■□□□□ 0.09
SMOQ99835 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.62■□□□□ 0.09
SMOQ99835 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.62■□□□□ 0.09
SMOQ99835 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.62■□□□□ 0.09
SMOQ99835 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.62■□□□□ 0.09
SMOQ99835 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.62■□□□□ 0.09
SMOQ99835 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.62■□□□□ 0.09
SMOQ99835 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.62■□□□□ 0.09
SMOQ99835 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.62■□□□□ 0.09
SMOQ99835 AL162426.1-201ENST00000624141 743 ntBASIC15.62■□□□□ 0.09
SMOQ99835 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
SMOQ99835 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.62■□□□□ 0.09
SMOQ99835 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SMOQ99835 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.62■□□□□ 0.09
SMOQ99835 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SMOQ99835 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SMOQ99835 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SMOQ99835 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.62■□□□□ 0.09
SMOQ99835 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms