Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 RN7SKP214-201ENST00000364208 315 ntBASIC15.24■□□□□ 0.03
PHOX2BQ99453 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 RPL8P2-201ENST00000430538 502 ntBASIC15.24■□□□□ 0.03
PHOX2BQ99453 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 AC024293.1-201ENST00000467930 498 ntBASIC15.24■□□□□ 0.03
PHOX2BQ99453 AP002490.2-201ENST00000524791 560 ntBASIC15.24■□□□□ 0.03
PHOX2BQ99453 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 ZACNP1-201ENST00000612259 710 ntBASIC15.24■□□□□ 0.03
PHOX2BQ99453 AC022960.2-201ENST00000616300 666 ntBASIC15.24■□□□□ 0.03
PHOX2BQ99453 AL391262.2-201ENST00000622466 494 ntBASIC15.24■□□□□ 0.03
PHOX2BQ99453 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.24■□□□□ 0.03
PHOX2BQ99453 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.24■□□□□ 0.03
PHOX2BQ99453 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.24■□□□□ 0.03
PHOX2BQ99453 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHOX2BQ99453 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AL365203.3-201ENST00000609742 2057 ntBASIC15.23■□□□□ 0.03
PHOX2BQ99453 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AL391280.1-201ENST00000506969 1062 ntBASIC15.23■□□□□ 0.03
PHOX2BQ99453 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AL353708.1-201ENST00000567904 1257 ntBASIC15.23■□□□□ 0.03
PHOX2BQ99453 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PHOX2BQ99453 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHOX2BQ99453 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms