Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 AP001267.2-201ENST00000532619 2086 ntBASIC15.9■□□□□ 0.14
TRIM11Q96F44 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.89■□□□□ 0.14
TRIM11Q96F44 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 EIF3FP3-201ENST00000434851 1086 ntBASIC15.89■□□□□ 0.13
TRIM11Q96F44 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 AC092364.2-202ENST00000597012 1073 ntBASIC15.89■□□□□ 0.13
TRIM11Q96F44 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TRIM11Q96F44 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRIM11Q96F44 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 AGGF1P1-201ENST00000509500 2073 ntBASIC15.88■□□□□ 0.13
TRIM11Q96F44 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 AC009486.1-201ENST00000569860 813 ntBASIC15.88■□□□□ 0.13
TRIM11Q96F44 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 CHCHD2P3-201ENST00000603038 451 ntBASIC15.88■□□□□ 0.13
TRIM11Q96F44 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 KRT8P35-201ENST00000483942 1338 ntBASIC15.88■□□□□ 0.13
TRIM11Q96F44 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM11Q96F44 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRIM11Q96F44 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 SALL4P5-201ENST00000419001 1760 ntBASIC15.87■□□□□ 0.13
TRIM11Q96F44 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM11Q96F44 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM11Q96F44 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms