Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 AL359258.3-201ENST00000622910 2331 ntBASIC15.34■□□□□ 0.05
PTCD2Q8WV60 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 AC018442.1-201ENST00000421439 2061 ntBASIC15.34■□□□□ 0.05
PTCD2Q8WV60 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.34■□□□□ 0.05
PTCD2Q8WV60 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PTCD2Q8WV60 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTCD2Q8WV60 AIRN-202ENST00000609176 1489 ntTSL 5 BASIC15.33■□□□□ 0.05
PTCD2Q8WV60 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTCD2Q8WV60 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTCD2Q8WV60 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTCD2Q8WV60 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTCD2Q8WV60 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTCD2Q8WV60 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTCD2Q8WV60 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.33■□□□□ 0.05
PTCD2Q8WV60 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.33■□□□□ 0.05
PTCD2Q8WV60 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTCD2Q8WV60 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 AL158070.2-201ENST00000623713 1621 ntBASIC15.33■□□□□ 0.04
PTCD2Q8WV60 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 C1QBPP1-201ENST00000400117 770 ntBASIC15.33■□□□□ 0.04
PTCD2Q8WV60 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 AC007389.4-201ENST00000454674 793 ntBASIC15.33■□□□□ 0.04
PTCD2Q8WV60 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 AC009268.1-201ENST00000561352 1203 ntBASIC15.33■□□□□ 0.04
PTCD2Q8WV60 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 MIR5189-201ENST00000577370 114 ntBASIC15.33■□□□□ 0.04
PTCD2Q8WV60 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 AC005252.2-201ENST00000624630 1141 ntBASIC15.33■□□□□ 0.04
PTCD2Q8WV60 PRSS30P-206ENST00000641773 873 ntBASIC15.33■□□□□ 0.04
PTCD2Q8WV60 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTCD2Q8WV60 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 HLA-K-203ENST00000430151 1046 ntBASIC15.32■□□□□ 0.04
PTCD2Q8WV60 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 DEFT1P-201ENST00000453425 496 ntBASIC15.32■□□□□ 0.04
PTCD2Q8WV60 RNU6-775P-201ENST00000459318 96 ntBASIC15.32■□□□□ 0.04
PTCD2Q8WV60 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 AC034229.4-201ENST00000607861 441 ntBASIC15.32■□□□□ 0.04
PTCD2Q8WV60 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 AC080188.3-201ENST00000624842 748 ntBASIC15.32■□□□□ 0.04
PTCD2Q8WV60 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTCD2Q8WV60 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms