Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 HLA-K-203ENST00000430151 1046 ntBASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 RPL13AP25-201ENST00000484130 612 ntBASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 SERBP1P5-201ENST00000510079 1181 ntBASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 AC093813.1-201ENST00000605066 256 ntBASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 AJ011932.1-201ENST00000621707 465 ntBASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 AC005089.1-201ENST00000619486 2241 ntBASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 AC139749.1-202ENST00000617529 3139 ntBASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ZNF439Q8NDP4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 AC106881.1-201ENST00000605849 3329 ntBASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 AL645937.2-201ENST00000396808 931 ntBASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 DFFBP1-201ENST00000433250 979 ntBASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 MIR8072-201ENST00000614241 80 ntBASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 AL158070.2-201ENST00000623713 1621 ntBASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 AC007292.2-201ENST00000593524 1812 ntBASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 AL157414.3-201ENST00000624276 1954 ntBASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 INTS4P2-202ENST00000614726 2019 ntBASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 CICP14-201ENST00000629111 2732 ntBASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 AC131212.3-201ENST00000624087 4219 ntBASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZNF439Q8NDP4 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
ZNF439Q8NDP4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms