Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PROM2Q8N271 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PROM2Q8N271 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PROM2Q8N271 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PROM2Q8N271 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC18.83■□□□□ 0.6
PROM2Q8N271 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PROM2Q8N271 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PROM2Q8N271 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PROM2Q8N271 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 AP003680.1-201ENST00000598970 3660 ntBASIC18.82■□□□□ 0.6
PROM2Q8N271 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PROM2Q8N271 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PROM2Q8N271 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.82■□□□□ 0.6
PROM2Q8N271 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PROM2Q8N271 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.82■□□□□ 0.6
PROM2Q8N271 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC18.82■□□□□ 0.6
PROM2Q8N271 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC18.82■□□□□ 0.6
PROM2Q8N271 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.82■□□□□ 0.6
PROM2Q8N271 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC18.82■□□□□ 0.6
PROM2Q8N271 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC18.82■□□□□ 0.6
PROM2Q8N271 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 RNU6-775P-201ENST00000459318 96 ntBASIC18.82■□□□□ 0.6
PROM2Q8N271 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC18.82■□□□□ 0.6
PROM2Q8N271 GCOM2-201ENST00000509133 1104 ntBASIC18.82■□□□□ 0.6
PROM2Q8N271 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PROM2Q8N271 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
PROM2Q8N271 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC18.82■□□□□ 0.6
PROM2Q8N271 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.82■□□□□ 0.6
PROM2Q8N271 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 AC243964.3-201ENST00000623022 2028 ntBASIC18.82■□□□□ 0.6
PROM2Q8N271 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 AL139384.1-201ENST00000612143 3047 ntBASIC18.82■□□□□ 0.6
PROM2Q8N271 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.82■□□□□ 0.6
PROM2Q8N271 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC18.82■□□□□ 0.6
PROM2Q8N271 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.82■□□□□ 0.6
PROM2Q8N271 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PROM2Q8N271 ZBED1P1-201ENST00000502364 1930 ntBASIC18.82■□□□□ 0.6
PROM2Q8N271 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PROM2Q8N271 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.82■□□□□ 0.6
PROM2Q8N271 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PROM2Q8N271 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.82■□□□□ 0.6
PROM2Q8N271 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.82■□□□□ 0.6
PROM2Q8N271 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PROM2Q8N271 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
PROM2Q8N271 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PROM2Q8N271 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.81■□□□□ 0.6
PROM2Q8N271 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PROM2Q8N271 AHCYP4-201ENST00000419201 1315 ntBASIC18.81■□□□□ 0.6
PROM2Q8N271 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
PROM2Q8N271 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PROM2Q8N271 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PROM2Q8N271 TLE1P1-201ENST00000422965 589 ntBASIC18.81■□□□□ 0.6
PROM2Q8N271 AC073310.1-201ENST00000423226 1033 ntBASIC18.81■□□□□ 0.6
PROM2Q8N271 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18.81■□□□□ 0.6
PROM2Q8N271 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC18.81■□□□□ 0.6
PROM2Q8N271 RN7SL530P-201ENST00000485097 298 ntBASIC18.81■□□□□ 0.6
PROM2Q8N271 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PROM2Q8N271 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC18.81■□□□□ 0.6
PROM2Q8N271 AC010632.2-201ENST00000588369 1224 ntBASIC18.81■□□□□ 0.6
PROM2Q8N271 RPS5-204ENST00000598098 536 ntTSL 2 BASIC18.81■□□□□ 0.6
PROM2Q8N271 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PROM2Q8N271 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PROM2Q8N271 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.81■□□□□ 0.6
PROM2Q8N271 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PROM2Q8N271 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PROM2Q8N271 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PROM2Q8N271 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PROM2Q8N271 MAPK10-379ENST00000642013 1385 ntBASIC18.81■□□□□ 0.6
PROM2Q8N271 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PROM2Q8N271 AL118508.1-201ENST00000613502 2345 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms