Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.4■□□□□ 0.06
SIX5Q8N196 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.4■□□□□ 0.06
SIX5Q8N196 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
SIX5Q8N196 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 AC103810.10-201ENST00000606504 343 ntBASIC15.4■□□□□ 0.06
SIX5Q8N196 AC051619.9-201ENST00000623237 597 ntBASIC15.4■□□□□ 0.06
SIX5Q8N196 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 AL122018.1-201ENST00000446607 2310 ntBASIC15.4■□□□□ 0.06
SIX5Q8N196 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SIX5Q8N196 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.4■□□□□ 0.06
SIX5Q8N196 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SIX5Q8N196 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SIX5Q8N196 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
SIX5Q8N196 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.39■□□□□ 0.05
SIX5Q8N196 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SIX5Q8N196 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
SIX5Q8N196 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.39■□□□□ 0.05
SIX5Q8N196 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.39■□□□□ 0.05
SIX5Q8N196 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 RPS9P1-201ENST00000419943 583 ntBASIC15.39■□□□□ 0.05
SIX5Q8N196 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.39■□□□□ 0.05
SIX5Q8N196 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.39■□□□□ 0.05
SIX5Q8N196 RPL7P35-201ENST00000446943 740 ntBASIC15.39■□□□□ 0.05
SIX5Q8N196 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
SIX5Q8N196 POU5F1P2-201ENST00000521750 823 ntBASIC15.39■□□□□ 0.05
SIX5Q8N196 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SIX5Q8N196 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.39■□□□□ 0.05
SIX5Q8N196 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SIX5Q8N196 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.39■□□□□ 0.05
SIX5Q8N196 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.39■□□□□ 0.05
SIX5Q8N196 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.39■□□□□ 0.05
SIX5Q8N196 E2F3P2-201ENST00000447755 1422 ntBASIC15.39■□□□□ 0.05
SIX5Q8N196 AP000593.2-201ENST00000542775 1433 ntBASIC15.39■□□□□ 0.05
SIX5Q8N196 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 AC025271.4-201ENST00000621477 1726 ntBASIC15.39■□□□□ 0.05
SIX5Q8N196 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SIX5Q8N196 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SIX5Q8N196 AC074138.1-201ENST00000611182 1303 ntBASIC15.39■□□□□ 0.05
SIX5Q8N196 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.39■□□□□ 0.05
SIX5Q8N196 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.39■□□□□ 0.05
SIX5Q8N196 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.39■□□□□ 0.05
SIX5Q8N196 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.39■□□□□ 0.05
SIX5Q8N196 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.38■□□□□ 0.05
SIX5Q8N196 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
SIX5Q8N196 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.38■□□□□ 0.05
SIX5Q8N196 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.38■□□□□ 0.05
SIX5Q8N196 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.38■□□□□ 0.05
SIX5Q8N196 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SIX5Q8N196 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SIX5Q8N196 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.38■□□□□ 0.05
SIX5Q8N196 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms