Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 COX20P1-201ENST00000366529 357 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 KRT8P2-201ENST00000556193 944 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 FO393412.1-201ENST00000619841 382 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 AC019109.1-201ENST00000401725 1874 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 AC093826.1-201ENST00000508655 993 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 AC084752.1-201ENST00000509766 622 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 AC106047.2-201ENST00000511723 743 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 AC010976.2-201ENST00000609697 852 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 AC011471.3-201ENST00000623576 402 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 AGAP7P-201ENST00000582299 2062 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 AGAP14-201ENST00000624701 2060 ntBASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL27A1Q8IZC6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 AC006372.4-201ENST00000624122 1543 ntBASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 AC013268.4-201ENST00000637413 2228 ntBASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 AC098934.1-203ENST00000442868 1262 ntBASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 DNM1P51-201ENST00000558149 522 ntBASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 USB1-205ENST00000561743 1135 ntTSL 3 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 NDUFB10P1-201ENST00000567319 521 ntBASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 TEKT4P2-202ENST00000559466 1312 ntBASIC13.66□□□□□ -0.22
COL27A1Q8IZC6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AC018442.1-201ENST00000421439 2061 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 RPS23-207ENST00000511844 530 ntTSL 2 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 RN7SL357P-201ENST00000581065 298 ntBASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 HKR1-225ENST00000592168 566 ntTSL 4 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.65□□□□□ -0.22
COL27A1Q8IZC6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms