Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 AL161772.1-201ENST00000610494 4412 ntBASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 RPL7P3-201ENST00000441388 714 ntBASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 AC234783.1-201ENST00000441761 496 ntBASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 AC022210.1-201ENST00000449856 793 ntBASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 CTBP2P5-201ENST00000454986 1264 ntBASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 FAM8A2P-201ENST00000528813 1142 ntBASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 AP000812.2-201ENST00000538934 718 ntBASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 SNX29P1-201ENST00000548357 1007 ntBASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 MIR6775-201ENST00000617557 69 ntBASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 AC020910.5-201ENST00000623668 1865 ntBASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.8■□□□□ 0.12
SCUBE3Q8IX30 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 ANKRD19P-201ENST00000338192 862 ntBASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 KLF2P4-201ENST00000451959 1225 ntBASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 AC138466.3-201ENST00000619983 221 ntBASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 AC138951.2-201ENST00000623455 1161 ntBASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 SALL4P5-201ENST00000419001 1760 ntBASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SCUBE3Q8IX30 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.78■□□□□ 0.12
SCUBE3Q8IX30 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms