Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRK2Q5S007 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRK2Q5S007 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 RN7SL147P-201ENST00000487345 298 ntBASIC12.73□□□□□ -0.37
LRRK2Q5S007 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 AP002353.1-201ENST00000528257 1599 ntBASIC12.73□□□□□ -0.37
LRRK2Q5S007 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.73□□□□□ -0.37
LRRK2Q5S007 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 PIFO-201ENST00000369737 746 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 AC026412.1-206ENST00000502273 206 ntBASIC12.73□□□□□ -0.37
LRRK2Q5S007 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 OR3A1-202ENST00000615105 966 ntBASIC12.73□□□□□ -0.37
LRRK2Q5S007 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC12.73□□□□□ -0.37
LRRK2Q5S007 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LRRK2Q5S007 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LRRK2Q5S007 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 AL356000.1-201ENST00000441073 1238 ntBASIC12.72□□□□□ -0.37
LRRK2Q5S007 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 AC006986.1-201ENST00000612764 241 ntBASIC12.72□□□□□ -0.37
LRRK2Q5S007 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LRRK2Q5S007 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 AC147876.1-201ENST00000504408 322 ntBASIC12.72□□□□□ -0.37
LRRK2Q5S007 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.72□□□□□ -0.37
LRRK2Q5S007 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms