Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 AC015656.1-201ENST00000624209 3578 ntBASIC14.35□□□□□ -0.11
SPIN4Q56A73 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 PIN1P1-201ENST00000412108 996 ntBASIC14.35□□□□□ -0.11
SPIN4Q56A73 AC007969.1-201ENST00000433675 447 ntBASIC14.35□□□□□ -0.11
SPIN4Q56A73 BCRP1-201ENST00000444246 691 ntBASIC14.35□□□□□ -0.11
SPIN4Q56A73 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 AC140912.1-201ENST00000577171 1054 ntBASIC14.35□□□□□ -0.11
SPIN4Q56A73 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 CU634019.7-201ENST00000624153 1185 ntBASIC14.35□□□□□ -0.11
SPIN4Q56A73 FP236241.2-201ENST00000624906 1185 ntBASIC14.35□□□□□ -0.11
SPIN4Q56A73 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 AC097359.2-201ENST00000604992 2389 ntBASIC14.35□□□□□ -0.11
SPIN4Q56A73 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPIN4Q56A73 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 KRT8P35-201ENST00000483942 1338 ntBASIC14.35□□□□□ -0.11
SPIN4Q56A73 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SPIN4Q56A73 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 SPCS2P1-201ENST00000561636 679 ntBASIC14.34□□□□□ -0.11
SPIN4Q56A73 AC009486.1-201ENST00000569860 813 ntBASIC14.34□□□□□ -0.11
SPIN4Q56A73 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 RN7SL204P-201ENST00000582831 262 ntBASIC14.34□□□□□ -0.11
SPIN4Q56A73 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 AC008494.3-201ENST00000606615 944 ntBASIC14.34□□□□□ -0.11
SPIN4Q56A73 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 GRK6P1-201ENST00000400595 1711 ntBASIC14.34□□□□□ -0.11
SPIN4Q56A73 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SPIN4Q56A73 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SPIN4Q56A73 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SPIN4Q56A73 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPIN4Q56A73 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPIN4Q56A73 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SPIN4Q56A73 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SPIN4Q56A73 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPIN4Q56A73 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SPIN4Q56A73 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SPIN4Q56A73 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPIN4Q56A73 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPIN4Q56A73 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPIN4Q56A73 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SPIN4Q56A73 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SPIN4Q56A73 SALL4P5-201ENST00000419001 1760 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms