Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 AL009178.2-201ENST00000597278 2719 ntBASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 AC015656.1-201ENST00000624209 3578 ntBASIC15.76■□□□□ 0.11
PTPN20Q4JDL3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 GCOM2-201ENST00000509133 1104 ntBASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.75■□□□□ 0.11
PTPN20Q4JDL3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 U91328.1-201ENST00000437528 223 ntBASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 AC138951.2-201ENST00000623455 1161 ntBASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
PTPN20Q4JDL3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms