Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP1Q04837 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.72□□□□□ -0.37
SSBP1Q04837 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP1Q04837 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP1Q04837 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP1Q04837 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP1Q04837 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SSBP1Q04837 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
SSBP1Q04837 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SSBP1Q04837 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP1Q04837 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP1Q04837 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP1Q04837 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP1Q04837 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SSBP1Q04837 AC068760.1-201ENST00000493579 1953 ntBASIC12.71□□□□□ -0.37
SSBP1Q04837 AL157414.3-201ENST00000624276 1954 ntBASIC12.71□□□□□ -0.37
SSBP1Q04837 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP1Q04837 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP1Q04837 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP1Q04837 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP1Q04837 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SSBP1Q04837 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP1Q04837 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.71□□□□□ -0.37
SSBP1Q04837 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.71□□□□□ -0.37
SSBP1Q04837 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SSBP1Q04837 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.71□□□□□ -0.37
SSBP1Q04837 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.71□□□□□ -0.37
SSBP1Q04837 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.71□□□□□ -0.37
SSBP1Q04837 AC026150.2-201ENST00000564693 1156 ntBASIC12.71□□□□□ -0.37
SSBP1Q04837 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SSBP1Q04837 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
SSBP1Q04837 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP1Q04837 AC092902.6-201ENST00000641783 218 ntBASIC12.71□□□□□ -0.37
SSBP1Q04837 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SSBP1Q04837 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP1Q04837 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP1Q04837 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP1Q04837 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.71□□□□□ -0.37
SSBP1Q04837 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP1Q04837 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP1Q04837 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP1Q04837 COL6A4P2-202ENST00000504443 2753 ntBASIC12.71□□□□□ -0.38
SSBP1Q04837 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.71□□□□□ -0.38
SSBP1Q04837 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.71□□□□□ -0.38
SSBP1Q04837 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.71□□□□□ -0.38
SSBP1Q04837 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP1Q04837 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.71□□□□□ -0.38
SSBP1Q04837 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
SSBP1Q04837 FAM90A12P-201ENST00000519497 2375 ntBASIC12.71□□□□□ -0.38
SSBP1Q04837 FAM90A24P-201ENST00000520792 2369 ntBASIC12.71□□□□□ -0.38
SSBP1Q04837 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP1Q04837 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.71□□□□□ -0.38
SSBP1Q04837 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SSBP1Q04837 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP1Q04837 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP1Q04837 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SSBP1Q04837 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP1Q04837 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.71□□□□□ -0.38
SSBP1Q04837 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
SSBP1Q04837 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP1Q04837 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP1Q04837 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
SSBP1Q04837 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SSBP1Q04837 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP1Q04837 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 AL137783.1-201ENST00000623494 1896 ntBASIC12.7□□□□□ -0.38
SSBP1Q04837 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SSBP1Q04837 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP1Q04837 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
SSBP1Q04837 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SSBP1Q04837 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SSBP1Q04837 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SSBP1Q04837 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP1Q04837 SERBP1P3-201ENST00000459980 809 ntBASIC12.7□□□□□ -0.38
SSBP1Q04837 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.7□□□□□ -0.38
SSBP1Q04837 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.7□□□□□ -0.38
SSBP1Q04837 KRT8P48-201ENST00000515599 1220 ntBASIC12.7□□□□□ -0.38
SSBP1Q04837 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP1Q04837 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
SSBP1Q04837 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SSBP1Q04837 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms