Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AC118758.2-201ENST00000614242 2813 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AL133267.1-201ENST00000398220 340 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 KLF2P3-201ENST00000451977 1087 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 HLA-J-203ENST00000494367 1087 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AC027369.6-201ENST00000525520 931 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AL512361.1-201ENST00000554200 418 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AC051619.7-201ENST00000568314 623 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AC074044.1-201ENST00000609673 707 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 TEX28P1-201ENST00000613479 1221 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 TEX28P2-201ENST00000617764 1221 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AF228730.6-201ENST00000641497 218 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AC084121.3-201ENST00000641716 218 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AL109936.8-201ENST00000641772 604 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 LINC01230-201ENST00000625222 3017 ntBASIC11.59□□□□□ -0.55
HIST1H1AQ02539 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
HIST1H1AQ02539 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms