Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL359258.3-201ENST00000622910 2331 ntBASIC13.33□□□□□ -0.28
NKX6-1P78426 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX6-1P78426 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX6-1P78426 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX6-1P78426 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX6-1P78426 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.32□□□□□ -0.28
NKX6-1P78426 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX6-1P78426 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX6-1P78426 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
NKX6-1P78426 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX6-1P78426 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX6-1P78426 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX6-1P78426 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX6-1P78426 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 AC093433.1-201ENST00000458048 571 ntBASIC13.32□□□□□ -0.28
NKX6-1P78426 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX6-1P78426 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX6-1P78426 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX6-1P78426 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX6-1P78426 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NKX6-1P78426 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 CLUHP6-201ENST00000580789 941 ntBASIC13.32□□□□□ -0.28
NKX6-1P78426 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.32□□□□□ -0.28
NKX6-1P78426 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.32□□□□□ -0.28
NKX6-1P78426 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.32□□□□□ -0.28
NKX6-1P78426 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.32□□□□□ -0.28
NKX6-1P78426 AC005252.2-201ENST00000624630 1141 ntBASIC13.32□□□□□ -0.28
NKX6-1P78426 AC008687.7-202ENST00000637404 953 ntBASIC13.32□□□□□ -0.28
NKX6-1P78426 AL645728.2-202ENST00000641679 227 ntBASIC13.32□□□□□ -0.28
NKX6-1P78426 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NKX6-1P78426 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NKX6-1P78426 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NKX6-1P78426 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX6-1P78426 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
NKX6-1P78426 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 AL731571.1-201ENST00000617058 5428 ntBASIC13.32□□□□□ -0.28
NKX6-1P78426 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NKX6-1P78426 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.32□□□□□ -0.28
NKX6-1P78426 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NKX6-1P78426 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX6-1P78426 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 AC139749.1-202ENST00000617529 3139 ntBASIC13.31□□□□□ -0.28
NKX6-1P78426 AC090616.6-203ENST00000579186 1945 ntBASIC13.31□□□□□ -0.28
NKX6-1P78426 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NKX6-1P78426 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
NKX6-1P78426 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX6-1P78426 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 MIR326-201ENST00000362220 95 ntBASIC13.31□□□□□ -0.28
NKX6-1P78426 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX6-1P78426 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX6-1P78426 ZNF767P-206ENST00000513792 565 ntBASIC13.31□□□□□ -0.28
NKX6-1P78426 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.31□□□□□ -0.28
NKX6-1P78426 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX6-1P78426 KRT90P-201ENST00000549264 1064 ntBASIC13.31□□□□□ -0.28
NKX6-1P78426 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
NKX6-1P78426 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX6-1P78426 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.31□□□□□ -0.28
NKX6-1P78426 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX6-1P78426 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX6-1P78426 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms