Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 AC136621.1-201ENST00000624017 2304 ntBASIC14.84□□□□□ -0.03
SRP54P61011 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SRP54P61011 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 TMBIM7P-203ENST00000641617 1718 ntBASIC14.84□□□□□ -0.03
SRP54P61011 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.84□□□□□ -0.03
SRP54P61011 AC112693.3-201ENST00000624819 1983 ntBASIC14.84□□□□□ -0.03
SRP54P61011 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SRP54P61011 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 MIR1247-201ENST00000408206 136 ntBASIC14.84□□□□□ -0.03
SRP54P61011 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.84□□□□□ -0.03
SRP54P61011 GPAA1P2-201ENST00000417923 928 ntBASIC14.84□□□□□ -0.03
SRP54P61011 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.84□□□□□ -0.03
SRP54P61011 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.84□□□□□ -0.03
SRP54P61011 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.84□□□□□ -0.03
SRP54P61011 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 AP003171.2-201ENST00000528208 925 ntBASIC14.84□□□□□ -0.03
SRP54P61011 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
SRP54P61011 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.84□□□□□ -0.03
SRP54P61011 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.84□□□□□ -0.03
SRP54P61011 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 AL096828.3-201ENST00000615354 462 ntBASIC14.84□□□□□ -0.03
SRP54P61011 AC244157.2-201ENST00000616239 1006 ntBASIC14.84□□□□□ -0.03
SRP54P61011 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SRP54P61011 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.84□□□□□ -0.03
SRP54P61011 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 FKBP4P6-201ENST00000457486 1332 ntBASIC14.84□□□□□ -0.03
SRP54P61011 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 PCDHA3-202ENST00000532566 4594 ntBASIC14.84□□□□□ -0.03
SRP54P61011 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SRP54P61011 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP54P61011 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP54P61011 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SRP54P61011 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
SRP54P61011 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SRP54P61011 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP54P61011 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 AL133338.1-201ENST00000565695 1517 ntBASIC14.83□□□□□ -0.04
SRP54P61011 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.83□□□□□ -0.04
SRP54P61011 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.83□□□□□ -0.04
SRP54P61011 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.83□□□□□ -0.04
SRP54P61011 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 AP001258.2-201ENST00000529891 490 ntBASIC14.83□□□□□ -0.04
SRP54P61011 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.83□□□□□ -0.04
SRP54P61011 MIR3615-201ENST00000581999 87 ntBASIC14.83□□□□□ -0.04
SRP54P61011 AC103810.3-201ENST00000583567 96 ntBASIC14.83□□□□□ -0.04
SRP54P61011 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.83□□□□□ -0.04
SRP54P61011 AL008638.5-201ENST00000623814 1298 ntBASIC14.83□□□□□ -0.04
SRP54P61011 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP54P61011 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SRP54P61011 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SRP54P61011 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
SRP54P61011 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.83□□□□□ -0.04
SRP54P61011 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SRP54P61011 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.83□□□□□ -0.04
SRP54P61011 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP54P61011 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP54P61011 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP54P61011 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms