Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ATP1B3P54709 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
ATP1B3P54709 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ATP1B3P54709 LILRP1-201ENST00000444199 1370 ntBASIC13.1□□□□□ -0.31
ATP1B3P54709 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ATP1B3P54709 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
ATP1B3P54709 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.1□□□□□ -0.31
ATP1B3P54709 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 MBLAC2-202ENST00000514906 1936 ntBASIC13.1□□□□□ -0.31
ATP1B3P54709 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ATP1B3P54709 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
ATP1B3P54709 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.1□□□□□ -0.31
ATP1B3P54709 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.1□□□□□ -0.31
ATP1B3P54709 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
ATP1B3P54709 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.1□□□□□ -0.31
ATP1B3P54709 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.1□□□□□ -0.31
ATP1B3P54709 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.1□□□□□ -0.31
ATP1B3P54709 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.1□□□□□ -0.31
ATP1B3P54709 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.1□□□□□ -0.31
ATP1B3P54709 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ATP1B3P54709 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATP1B3P54709 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.1□□□□□ -0.31
ATP1B3P54709 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ATP1B3P54709 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.09□□□□□ -0.31
ATP1B3P54709 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 AC097359.2-201ENST00000604992 2389 ntBASIC13.09□□□□□ -0.31
ATP1B3P54709 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.09□□□□□ -0.31
ATP1B3P54709 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.09□□□□□ -0.31
ATP1B3P54709 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.09□□□□□ -0.31
ATP1B3P54709 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.09□□□□□ -0.31
ATP1B3P54709 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ATP1B3P54709 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.09□□□□□ -0.31
ATP1B3P54709 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.09□□□□□ -0.31
ATP1B3P54709 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ATP1B3P54709 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.09□□□□□ -0.31
ATP1B3P54709 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATP1B3P54709 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ATP1B3P54709 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ATP1B3P54709 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ATP1B3P54709 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms