Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.93□□□□□ -0.5
CDC34P49427 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.93□□□□□ -0.5
CDC34P49427 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.93□□□□□ -0.5
CDC34P49427 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.93□□□□□ -0.5
CDC34P49427 AL135744.1-201ENST00000565098 629 ntBASIC11.93□□□□□ -0.5
CDC34P49427 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.93□□□□□ -0.5
CDC34P49427 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.93□□□□□ -0.5
CDC34P49427 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.93□□□□□ -0.5
CDC34P49427 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.93□□□□□ -0.5
CDC34P49427 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.93□□□□□ -0.5
CDC34P49427 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.93□□□□□ -0.5
CDC34P49427 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC34P49427 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
CDC34P49427 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.93□□□□□ -0.5
CDC34P49427 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 DNM1P41-201ENST00000623634 3350 ntBASIC11.92□□□□□ -0.5
CDC34P49427 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.92□□□□□ -0.5
CDC34P49427 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 INE2-201ENST00000630399 1874 ntBASIC11.92□□□□□ -0.5
CDC34P49427 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CDC34P49427 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
CDC34P49427 AC074386.1-202ENST00000463561 864 ntBASIC11.92□□□□□ -0.5
CDC34P49427 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 AC018845.2-201ENST00000568326 409 ntBASIC11.92□□□□□ -0.5
CDC34P49427 AP002472.1-201ENST00000577490 586 ntBASIC11.92□□□□□ -0.5
CDC34P49427 AL121912.1-201ENST00000603683 238 ntBASIC11.92□□□□□ -0.5
CDC34P49427 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
CDC34P49427 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
CDC34P49427 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC34P49427 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC34P49427 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms