Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC10.21□□□□□ -0.78
CXCL5P42830 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.21□□□□□ -0.78
CXCL5P42830 AC015802.1-201ENST00000588104 1449 ntBASIC10.21□□□□□ -0.78
CXCL5P42830 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
CXCL5P42830 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC10.21□□□□□ -0.78
CXCL5P42830 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
CXCL5P42830 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
CXCL5P42830 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.78
CXCL5P42830 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC10.21□□□□□ -0.78
CXCL5P42830 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC10.21□□□□□ -0.78
CXCL5P42830 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC10.21□□□□□ -0.78
CXCL5P42830 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC10.21□□□□□ -0.78
CXCL5P42830 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CXCL5P42830 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CXCL5P42830 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC10.2□□□□□ -0.78
CXCL5P42830 OR2I1P-208ENST00000641137 4948 ntBASIC10.2□□□□□ -0.78
CXCL5P42830 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.2□□□□□ -0.78
CXCL5P42830 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
CXCL5P42830 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CXCL5P42830 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.2□□□□□ -0.78
CXCL5P42830 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
CXCL5P42830 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CXCL5P42830 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
CXCL5P42830 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.2□□□□□ -0.78
CXCL5P42830 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
CXCL5P42830 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
CXCL5P42830 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.2□□□□□ -0.78
CXCL5P42830 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 AC069335.1-201ENST00000489972 472 ntBASIC10.2□□□□□ -0.78
CXCL5P42830 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC10.2□□□□□ -0.78
CXCL5P42830 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
CXCL5P42830 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
CXCL5P42830 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC10.2□□□□□ -0.78
CXCL5P42830 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.2□□□□□ -0.78
CXCL5P42830 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC10.2□□□□□ -0.78
CXCL5P42830 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.2□□□□□ -0.78
CXCL5P42830 ALG1L8P-201ENST00000533887 760 ntBASIC10.2□□□□□ -0.78
CXCL5P42830 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.2□□□□□ -0.78
CXCL5P42830 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.2□□□□□ -0.78
CXCL5P42830 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.2□□□□□ -0.78
CXCL5P42830 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.2□□□□□ -0.78
CXCL5P42830 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.2□□□□□ -0.78
CXCL5P42830 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.2□□□□□ -0.78
CXCL5P42830 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC10.2□□□□□ -0.78
CXCL5P42830 AC005562.1-201ENST00000583030 3219 ntBASIC10.2□□□□□ -0.78
CXCL5P42830 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC10.2□□□□□ -0.78
CXCL5P42830 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.2□□□□□ -0.78
CXCL5P42830 AC140113.2-201ENST00000604370 208 ntBASIC10.2□□□□□ -0.78
CXCL5P42830 AC025181.2-201ENST00000606994 802 ntBASIC10.2□□□□□ -0.78
CXCL5P42830 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 AC007967.4-201ENST00000614700 386 ntBASIC10.2□□□□□ -0.78
CXCL5P42830 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.2□□□□□ -0.78
CXCL5P42830 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
CXCL5P42830 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 AL928921.2-201ENST00000641325 2442 ntBASIC10.2□□□□□ -0.78
CXCL5P42830 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CXCL5P42830 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms