Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFC4P35249 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.6■□□□□ 0.57
RFC4P35249 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFC4P35249 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RFC4P35249 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RFC4P35249 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.59■□□□□ 0.57
RFC4P35249 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC4P35249 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC4P35249 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RFC4P35249 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.59■□□□□ 0.57
RFC4P35249 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.59■□□□□ 0.57
RFC4P35249 AP005117.1-202ENST00000581724 1908 ntBASIC18.59■□□□□ 0.57
RFC4P35249 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC4P35249 BAK1P1-201ENST00000317045 636 ntBASIC18.59■□□□□ 0.57
RFC4P35249 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RFC4P35249 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18.59■□□□□ 0.57
RFC4P35249 AC004837.1-201ENST00000446267 564 ntBASIC18.59■□□□□ 0.57
RFC4P35249 DUX4L50-201ENST00000455245 715 ntBASIC18.59■□□□□ 0.57
RFC4P35249 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.59■□□□□ 0.57
RFC4P35249 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RFC4P35249 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.59■□□□□ 0.57
RFC4P35249 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC18.59■□□□□ 0.57
RFC4P35249 C2orf69P1-201ENST00000563532 1093 ntBASIC18.59■□□□□ 0.57
RFC4P35249 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.59■□□□□ 0.57
RFC4P35249 RN7SL470P-201ENST00000583069 259 ntBASIC18.59■□□□□ 0.57
RFC4P35249 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
RFC4P35249 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.59■□□□□ 0.57
RFC4P35249 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.59■□□□□ 0.57
RFC4P35249 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.59■□□□□ 0.57
RFC4P35249 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC4P35249 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC4P35249 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.59■□□□□ 0.57
RFC4P35249 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC4P35249 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC4P35249 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFC4P35249 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RFC4P35249 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC4P35249 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC4P35249 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFC4P35249 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.59■□□□□ 0.57
RFC4P35249 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.58■□□□□ 0.57
RFC4P35249 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RFC4P35249 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC4P35249 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.58■□□□□ 0.57
RFC4P35249 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC4P35249 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFC4P35249 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.58■□□□□ 0.57
RFC4P35249 MARK2P16-201ENST00000605714 1723 ntBASIC18.58■□□□□ 0.57
RFC4P35249 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.58■□□□□ 0.57
RFC4P35249 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RFC4P35249 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC4P35249 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RFC4P35249 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC4P35249 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.58■□□□□ 0.56
RFC4P35249 AL354861.1-201ENST00000445213 355 ntBASIC18.58■□□□□ 0.56
RFC4P35249 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFC4P35249 AC010234.1-201ENST00000494599 870 ntBASIC18.58■□□□□ 0.56
RFC4P35249 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC4P35249 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.58■□□□□ 0.56
RFC4P35249 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC4P35249 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.58■□□□□ 0.56
RFC4P35249 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFC4P35249 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RFC4P35249 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RFC4P35249 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.58■□□□□ 0.56
RFC4P35249 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.58■□□□□ 0.56
RFC4P35249 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC4P35249 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RFC4P35249 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC4P35249 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFC4P35249 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFC4P35249 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RFC4P35249 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC4P35249 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RFC4P35249 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC4P35249 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC4P35249 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RFC4P35249 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RFC4P35249 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC4P35249 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RFC4P35249 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC4P35249 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.57■□□□□ 0.56
RFC4P35249 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.57■□□□□ 0.56
RFC4P35249 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.57■□□□□ 0.56
RFC4P35249 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFC4P35249 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.57■□□□□ 0.56
RFC4P35249 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.57■□□□□ 0.56
RFC4P35249 CR383656.3-201ENST00000551315 183 ntBASIC18.57■□□□□ 0.56
RFC4P35249 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms