Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.74□□□□□ -0.05
SHMT2P34897 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SHMT2P34897 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.74□□□□□ -0.05
SHMT2P34897 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.74□□□□□ -0.05
SHMT2P34897 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHMT2P34897 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SHMT2P34897 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SHMT2P34897 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.74□□□□□ -0.05
SHMT2P34897 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SHMT2P34897 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SHMT2P34897 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SHMT2P34897 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHMT2P34897 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.74□□□□□ -0.05
SHMT2P34897 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHMT2P34897 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
SHMT2P34897 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHMT2P34897 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.73□□□□□ -0.05
SHMT2P34897 PCDHA3-202ENST00000532566 4594 ntBASIC14.73□□□□□ -0.05
SHMT2P34897 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SHMT2P34897 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 CICP14-201ENST00000629111 2732 ntBASIC14.73□□□□□ -0.05
SHMT2P34897 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SHMT2P34897 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.73□□□□□ -0.05
SHMT2P34897 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.73□□□□□ -0.05
SHMT2P34897 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.73□□□□□ -0.05
SHMT2P34897 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.73□□□□□ -0.05
SHMT2P34897 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SHMT2P34897 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.73□□□□□ -0.05
SHMT2P34897 ARSEP1-201ENST00000420443 635 ntBASIC14.73□□□□□ -0.05
SHMT2P34897 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.73□□□□□ -0.05
SHMT2P34897 CROCCP4-201ENST00000457096 498 ntBASIC14.73□□□□□ -0.05
SHMT2P34897 IGHV3-71-201ENST00000523324 359 ntBASIC14.73□□□□□ -0.05
SHMT2P34897 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.73□□□□□ -0.05
SHMT2P34897 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.73□□□□□ -0.05
SHMT2P34897 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.73□□□□□ -0.05
SHMT2P34897 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.73□□□□□ -0.05
SHMT2P34897 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.73□□□□□ -0.05
SHMT2P34897 GNRHR2-203ENST00000581100 1187 ntBASIC14.73□□□□□ -0.05
SHMT2P34897 AC132938.4-201ENST00000623835 848 ntBASIC14.73□□□□□ -0.05
SHMT2P34897 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.73□□□□□ -0.05
SHMT2P34897 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SHMT2P34897 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SHMT2P34897 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SHMT2P34897 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.73□□□□□ -0.05
SHMT2P34897 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SHMT2P34897 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.73□□□□□ -0.05
SHMT2P34897 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SHMT2P34897 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SHMT2P34897 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.73□□□□□ -0.05
SHMT2P34897 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SHMT2P34897 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHMT2P34897 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.73□□□□□ -0.05
SHMT2P34897 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
SHMT2P34897 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.72□□□□□ -0.05
SHMT2P34897 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHMT2P34897 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.72□□□□□ -0.05
SHMT2P34897 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHMT2P34897 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHMT2P34897 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHMT2P34897 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHMT2P34897 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHMT2P34897 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHMT2P34897 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SHMT2P34897 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHMT2P34897 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHMT2P34897 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.72□□□□□ -0.05
SHMT2P34897 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.72□□□□□ -0.05
SHMT2P34897 AL138709.1-201ENST00000614840 1693 ntBASIC14.72□□□□□ -0.05
SHMT2P34897 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.72□□□□□ -0.05
SHMT2P34897 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
SHMT2P34897 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.72□□□□□ -0.05
SHMT2P34897 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHMT2P34897 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.72□□□□□ -0.05
SHMT2P34897 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.72□□□□□ -0.05
SHMT2P34897 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.72□□□□□ -0.05
SHMT2P34897 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms