Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC092612.1-201ENST00000514501 998 ntBASIC20.55■□□□□ 0.88
CPS1P31327 IGHVIII-5-2-201ENST00000522505 261 ntBASIC20.55■□□□□ 0.88
CPS1P31327 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CPS1P31327 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC20.55■□□□□ 0.88
CPS1P31327 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC20.55■□□□□ 0.88
CPS1P31327 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CPS1P31327 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 TEKT4P2-202ENST00000559466 1312 ntBASIC20.55■□□□□ 0.88
CPS1P31327 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC20.55■□□□□ 0.88
CPS1P31327 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.55■□□□□ 0.88
CPS1P31327 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPS1P31327 WASH3P-207ENST00000560956 1394 ntBASIC20.54■□□□□ 0.88
CPS1P31327 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.54■□□□□ 0.88
CPS1P31327 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CPS1P31327 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 IGHEP2-201ENST00000519308 1256 ntBASIC20.54■□□□□ 0.88
CPS1P31327 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC20.54■□□□□ 0.88
CPS1P31327 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC20.54■□□□□ 0.88
CPS1P31327 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC20.54■□□□□ 0.88
CPS1P31327 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CPS1P31327 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC20.54■□□□□ 0.88
CPS1P31327 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.54■□□□□ 0.88
CPS1P31327 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC20.54■□□□□ 0.88
CPS1P31327 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPS1P31327 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC20.53■□□□□ 0.88
CPS1P31327 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC20.53■□□□□ 0.88
CPS1P31327 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC20.53■□□□□ 0.88
CPS1P31327 AC092570.1-201ENST00000414446 469 ntBASIC20.53■□□□□ 0.88
CPS1P31327 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC20.53■□□□□ 0.88
CPS1P31327 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC20.53■□□□□ 0.88
CPS1P31327 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 F11R-204ENST00000537746 1245 ntTSL 2 BASIC20.53■□□□□ 0.88
CPS1P31327 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC20.53■□□□□ 0.88
CPS1P31327 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC20.53■□□□□ 0.88
CPS1P31327 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC20.53■□□□□ 0.88
CPS1P31327 AC080013.5-201ENST00000607044 679 ntBASIC20.53■□□□□ 0.88
CPS1P31327 AC004466.2-201ENST00000614749 516 ntBASIC20.53■□□□□ 0.88
CPS1P31327 LINC00244-201ENST00000625073 613 ntBASIC20.53■□□□□ 0.88
CPS1P31327 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC20.53■□□□□ 0.88
CPS1P31327 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC20.53■□□□□ 0.88
CPS1P31327 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CPS1P31327 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 GEMIN8P4-201ENST00000380526 729 ntBASIC20.53■□□□□ 0.88
CPS1P31327 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC20.53■□□□□ 0.88
CPS1P31327 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC20.53■□□□□ 0.88
CPS1P31327 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPS1P31327 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC20.53■□□□□ 0.88
CPS1P31327 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC20.53■□□□□ 0.88
CPS1P31327 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC20.53■□□□□ 0.88
CPS1P31327 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPS1P31327 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPS1P31327 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC20.52■□□□□ 0.88
CPS1P31327 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPS1P31327 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPS1P31327 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC20.52■□□□□ 0.88
CPS1P31327 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms