Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC8P31273 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HOXC8P31273 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC8P31273 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 RPS9P1-201ENST00000419943 583 ntBASIC16.07■□□□□ 0.16
HOXC8P31273 AL592076.1-201ENST00000424448 303 ntBASIC16.07■□□□□ 0.16
HOXC8P31273 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC8P31273 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC8P31273 FTH1P22-201ENST00000456305 520 ntBASIC16.07■□□□□ 0.16
HOXC8P31273 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC8P31273 AP002803.1-201ENST00000528836 498 ntBASIC16.07■□□□□ 0.16
HOXC8P31273 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC8P31273 MIR4522-201ENST00000584932 87 ntBASIC16.07■□□□□ 0.16
HOXC8P31273 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.07■□□□□ 0.16
HOXC8P31273 AC007881.3-201ENST00000608897 607 ntBASIC16.07■□□□□ 0.16
HOXC8P31273 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.07■□□□□ 0.16
HOXC8P31273 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC8P31273 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HOXC8P31273 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.07■□□□□ 0.16
HOXC8P31273 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HOXC8P31273 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC8P31273 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HOXC8P31273 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.07■□□□□ 0.16
HOXC8P31273 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
HOXC8P31273 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HOXC8P31273 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
HOXC8P31273 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC8P31273 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HOXC8P31273 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC8P31273 AC091951.1-201ENST00000512854 2465 ntBASIC16.06■□□□□ 0.16
HOXC8P31273 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.06■□□□□ 0.16
HOXC8P31273 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.06■□□□□ 0.16
HOXC8P31273 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HOXC8P31273 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 AL512430.1-201ENST00000392575 860 ntBASIC16.06■□□□□ 0.16
HOXC8P31273 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.06■□□□□ 0.16
HOXC8P31273 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC8P31273 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HOXC8P31273 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC8P31273 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.06■□□□□ 0.16
HOXC8P31273 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HOXC8P31273 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
HOXC8P31273 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HOXC8P31273 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.06■□□□□ 0.16
HOXC8P31273 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HOXC8P31273 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC8P31273 AP002353.1-201ENST00000528257 1599 ntBASIC16.05■□□□□ 0.16
HOXC8P31273 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HOXC8P31273 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
HOXC8P31273 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.05■□□□□ 0.16
HOXC8P31273 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.05■□□□□ 0.16
HOXC8P31273 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HOXC8P31273 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HOXC8P31273 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
HOXC8P31273 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.05■□□□□ 0.16
HOXC8P31273 AL807761.2-201ENST00000422849 729 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms