Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
CD40P25942 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.92□□□□□ -0.34
CD40P25942 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CD40P25942 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.92□□□□□ -0.34
CD40P25942 SALL4P5-201ENST00000419001 1760 ntBASIC12.92□□□□□ -0.34
CD40P25942 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD40P25942 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CD40P25942 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CD40P25942 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40P25942 SBF1P1-201ENST00000444527 5631 ntBASIC12.91□□□□□ -0.34
CD40P25942 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
CD40P25942 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.91□□□□□ -0.34
CD40P25942 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40P25942 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40P25942 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.91□□□□□ -0.34
CD40P25942 ZNF767P-206ENST00000513792 565 ntBASIC12.91□□□□□ -0.34
CD40P25942 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40P25942 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 AC007663.3-201ENST00000609632 465 ntBASIC12.91□□□□□ -0.34
CD40P25942 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.91□□□□□ -0.34
CD40P25942 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
CD40P25942 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.91□□□□□ -0.34
CD40P25942 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CD40P25942 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
CD40P25942 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CD40P25942 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40P25942 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
CD40P25942 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 AC097376.2-205ENST00000610159 5334 ntBASIC12.91□□□□□ -0.34
CD40P25942 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CD40P25942 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.91□□□□□ -0.34
CD40P25942 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CD40P25942 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40P25942 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CD40P25942 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.9□□□□□ -0.34
CD40P25942 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.9□□□□□ -0.34
CD40P25942 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
CD40P25942 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 ZBED1P1-201ENST00000502364 1930 ntBASIC12.9□□□□□ -0.34
CD40P25942 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 AC018735.1-201ENST00000437208 1502 ntBASIC12.9□□□□□ -0.34
CD40P25942 AL133338.1-201ENST00000565695 1517 ntBASIC12.9□□□□□ -0.34
CD40P25942 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CD40P25942 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CD40P25942 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CD40P25942 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.9□□□□□ -0.34
CD40P25942 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.9□□□□□ -0.34
CD40P25942 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.9□□□□□ -0.34
CD40P25942 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.9□□□□□ -0.34
CD40P25942 AC126915.1-201ENST00000522847 1038 ntBASIC12.9□□□□□ -0.34
CD40P25942 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.9□□□□□ -0.34
CD40P25942 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40P25942 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40P25942 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms