Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP11P24347 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.27□□□□□ -0.12
MMP11P24347 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.27□□□□□ -0.12
MMP11P24347 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MMP11P24347 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP11P24347 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
MMP11P24347 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP11P24347 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
MMP11P24347 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
MMP11P24347 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MMP11P24347 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
MMP11P24347 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MMP11P24347 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MMP11P24347 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MMP11P24347 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
MMP11P24347 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.27□□□□□ -0.12
MMP11P24347 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.27□□□□□ -0.12
MMP11P24347 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
MMP11P24347 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MMP11P24347 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.27□□□□□ -0.13
MMP11P24347 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.27□□□□□ -0.13
MMP11P24347 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
MMP11P24347 MIR1202-201ENST00000408529 83 ntBASIC14.27□□□□□ -0.13
MMP11P24347 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.27□□□□□ -0.13
MMP11P24347 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.27□□□□□ -0.13
MMP11P24347 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.27□□□□□ -0.13
MMP11P24347 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MMP11P24347 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MMP11P24347 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.27□□□□□ -0.13
MMP11P24347 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.27□□□□□ -0.13
MMP11P24347 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.27□□□□□ -0.13
MMP11P24347 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.27□□□□□ -0.13
MMP11P24347 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP11P24347 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
MMP11P24347 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MMP11P24347 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MMP11P24347 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
MMP11P24347 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP11P24347 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MMP11P24347 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP11P24347 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP11P24347 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
MMP11P24347 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP11P24347 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
MMP11P24347 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.27□□□□□ -0.13
MMP11P24347 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.27□□□□□ -0.13
MMP11P24347 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.27□□□□□ -0.13
MMP11P24347 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
MMP11P24347 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.27□□□□□ -0.13
MMP11P24347 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.26□□□□□ -0.13
MMP11P24347 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.26□□□□□ -0.13
MMP11P24347 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
MMP11P24347 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
MMP11P24347 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 CICP14-201ENST00000629111 2732 ntBASIC14.26□□□□□ -0.13
MMP11P24347 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.26□□□□□ -0.13
MMP11P24347 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 AC104457.1-201ENST00000401024 814 ntBASIC14.26□□□□□ -0.13
MMP11P24347 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 AC022616.1-201ENST00000518688 554 ntBASIC14.26□□□□□ -0.13
MMP11P24347 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.26□□□□□ -0.13
MMP11P24347 ECM1P1-201ENST00000604092 1279 ntBASIC14.26□□□□□ -0.13
MMP11P24347 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
MMP11P24347 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 ENPP7P14-201ENST00000621765 1040 ntBASIC14.26□□□□□ -0.13
MMP11P24347 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.26□□□□□ -0.13
MMP11P24347 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
MMP11P24347 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MMP11P24347 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms