Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCNA2P20248 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.27□□□□□ -0.12
CCNA2P20248 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNA2P20248 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.27□□□□□ -0.12
CCNA2P20248 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCNA2P20248 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCNA2P20248 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.27□□□□□ -0.12
CCNA2P20248 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.27□□□□□ -0.12
CCNA2P20248 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCNA2P20248 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNA2P20248 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.27□□□□□ -0.12
CCNA2P20248 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.27□□□□□ -0.12
CCNA2P20248 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNA2P20248 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNA2P20248 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.27□□□□□ -0.13
CCNA2P20248 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CCNA2P20248 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.27□□□□□ -0.13
CCNA2P20248 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCNA2P20248 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.27□□□□□ -0.13
CCNA2P20248 PMS2P2-201ENST00000425039 1128 ntBASIC14.27□□□□□ -0.13
CCNA2P20248 KRT18P64-201ENST00000434946 1219 ntBASIC14.27□□□□□ -0.13
CCNA2P20248 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.27□□□□□ -0.13
CCNA2P20248 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.27□□□□□ -0.13
CCNA2P20248 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCNA2P20248 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCNA2P20248 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.27□□□□□ -0.13
CCNA2P20248 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.27□□□□□ -0.13
CCNA2P20248 AC010336.2-201ENST00000564226 506 ntBASIC14.27□□□□□ -0.13
CCNA2P20248 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.27□□□□□ -0.13
CCNA2P20248 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.27□□□□□ -0.13
CCNA2P20248 LINC01115-203ENST00000606068 577 ntBASIC14.27□□□□□ -0.13
CCNA2P20248 AL158211.3-201ENST00000607385 239 ntBASIC14.27□□□□□ -0.13
CCNA2P20248 AL590560.3-201ENST00000623350 461 ntBASIC14.27□□□□□ -0.13
CCNA2P20248 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.27□□□□□ -0.13
CCNA2P20248 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.27□□□□□ -0.13
CCNA2P20248 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNA2P20248 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CCNA2P20248 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CCNA2P20248 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNA2P20248 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CCNA2P20248 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.27□□□□□ -0.13
CCNA2P20248 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNA2P20248 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.27□□□□□ -0.13
CCNA2P20248 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
CCNA2P20248 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNA2P20248 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCNA2P20248 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCNA2P20248 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.26□□□□□ -0.13
CCNA2P20248 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.26□□□□□ -0.13
CCNA2P20248 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCNA2P20248 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 AC074338.1-201ENST00000416825 156 ntBASIC14.26□□□□□ -0.13
CCNA2P20248 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.26□□□□□ -0.13
CCNA2P20248 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.26□□□□□ -0.13
CCNA2P20248 AC055876.3-201ENST00000431496 288 ntBASIC14.26□□□□□ -0.13
CCNA2P20248 AC241585.1-201ENST00000433527 519 ntBASIC14.26□□□□□ -0.13
CCNA2P20248 AL512638.1-201ENST00000457493 794 ntBASIC14.26□□□□□ -0.13
CCNA2P20248 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.26□□□□□ -0.13
CCNA2P20248 AC093214.1-201ENST00000511688 1107 ntBASIC14.26□□□□□ -0.13
CCNA2P20248 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.26□□□□□ -0.13
CCNA2P20248 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.26□□□□□ -0.13
CCNA2P20248 AC025048.3-201ENST00000590609 569 ntBASIC14.26□□□□□ -0.13
CCNA2P20248 AC138649.4-201ENST00000612222 287 ntBASIC14.26□□□□□ -0.13
CCNA2P20248 AC005702.4-201ENST00000618393 416 ntBASIC14.26□□□□□ -0.13
CCNA2P20248 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.26□□□□□ -0.13
CCNA2P20248 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCNA2P20248 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms