Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
TOP1P11387 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.64■□□□□ 0.42
TOP1P11387 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TOP1P11387 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TOP1P11387 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TOP1P11387 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TOP1P11387 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TOP1P11387 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TOP1P11387 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TOP1P11387 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.64■□□□□ 0.41
TOP1P11387 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.64■□□□□ 0.41
TOP1P11387 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.64■□□□□ 0.41
TOP1P11387 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TOP1P11387 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.64■□□□□ 0.41
TOP1P11387 AL355994.2-201ENST00000447882 704 ntBASIC17.64■□□□□ 0.41
TOP1P11387 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 FTLP10-202ENST00000505798 471 ntBASIC17.64■□□□□ 0.41
TOP1P11387 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.64■□□□□ 0.41
TOP1P11387 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.64■□□□□ 0.41
TOP1P11387 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.64■□□□□ 0.41
TOP1P11387 AC106820.3-201ENST00000561653 397 ntBASIC17.64■□□□□ 0.41
TOP1P11387 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.64■□□□□ 0.41
TOP1P11387 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.64■□□□□ 0.41
TOP1P11387 OR10B1P-201ENST00000601666 907 ntBASIC17.64■□□□□ 0.41
TOP1P11387 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TOP1P11387 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TOP1P11387 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TOP1P11387 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.64■□□□□ 0.41
TOP1P11387 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
TOP1P11387 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.64■□□□□ 0.41
TOP1P11387 AL365209.1-201ENST00000624418 6473 ntBASIC17.64■□□□□ 0.41
TOP1P11387 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TOP1P11387 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.63■□□□□ 0.41
TOP1P11387 OR2I1P-210ENST00000642037 4691 ntBASIC17.63■□□□□ 0.41
TOP1P11387 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.63■□□□□ 0.41
TOP1P11387 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 CNN2P10-201ENST00000443067 918 ntBASIC17.63■□□□□ 0.41
TOP1P11387 AL391280.1-201ENST00000506969 1062 ntBASIC17.63■□□□□ 0.41
TOP1P11387 COX5BP1-201ENST00000507622 393 ntBASIC17.63■□□□□ 0.41
TOP1P11387 AP003171.2-201ENST00000528208 925 ntBASIC17.63■□□□□ 0.41
TOP1P11387 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.63■□□□□ 0.41
TOP1P11387 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 MYO15B-237ENST00000642007 4893 ntBASIC17.63■□□□□ 0.41
TOP1P11387 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.63■□□□□ 0.41
TOP1P11387 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
TOP1P11387 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TOP1P11387 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.63■□□□□ 0.41
TOP1P11387 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TOP1P11387 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TOP1P11387 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.63■□□□□ 0.41
TOP1P11387 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.62■□□□□ 0.41
TOP1P11387 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TOP1P11387 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.62■□□□□ 0.41
TOP1P11387 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TOP1P11387 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms