Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.14■□□□□ 0.01
THRAP10827 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.14■□□□□ 0.01
THRAP10827 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
THRAP10827 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.14■□□□□ 0.01
THRAP10827 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
THRAP10827 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
THRAP10827 AC006504.5-208ENST00000588784 2401 ntBASIC15.14■□□□□ 0.01
THRAP10827 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.14■□□□□ 0.01
THRAP10827 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
THRAP10827 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.14■□□□□ 0.01
THRAP10827 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.14■□□□□ 0.01
THRAP10827 RPL13AP25-201ENST00000484130 612 ntBASIC15.14■□□□□ 0.01
THRAP10827 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.14■□□□□ 0.01
THRAP10827 AL359711.2-201ENST00000563105 872 ntBASIC15.14■□□□□ 0.01
THRAP10827 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.14■□□□□ 0.01
THRAP10827 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.14■□□□□ 0.01
THRAP10827 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.14■□□□□ 0.01
THRAP10827 BTNL10-201ENST00000595971 695 ntBASIC15.14■□□□□ 0.01
THRAP10827 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
THRAP10827 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.14■□□□□ 0.01
THRAP10827 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.14■□□□□ 0.01
THRAP10827 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.14■□□□□ 0.01
THRAP10827 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.14■□□□□ 0.01
THRAP10827 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
THRAP10827 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
THRAP10827 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THRAP10827 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 BX640514.1-201ENST00000583223 1918 ntBASIC15.13■□□□□ 0.01
THRAP10827 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.13■□□□□ 0.01
THRAP10827 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
THRAP10827 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
THRAP10827 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
THRAP10827 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 KRT43P-201ENST00000434019 910 ntBASIC15.13■□□□□ 0.01
THRAP10827 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.13■□□□□ 0.01
THRAP10827 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.13■□□□□ 0.01
THRAP10827 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.13■□□□□ 0.01
THRAP10827 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.13■□□□□ 0.01
THRAP10827 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.13■□□□□ 0.01
THRAP10827 AC119751.2-201ENST00000504529 210 ntBASIC15.13■□□□□ 0.01
THRAP10827 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.13■□□□□ 0.01
THRAP10827 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.13■□□□□ 0.01
THRAP10827 AP005482.1-201ENST00000563722 1273 ntBASIC15.13■□□□□ 0.01
THRAP10827 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.13■□□□□ 0.01
THRAP10827 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 MIR5189-201ENST00000577370 114 ntBASIC15.13■□□□□ 0.01
THRAP10827 AC233724.13-201ENST00000598383 410 ntBASIC15.13■□□□□ 0.01
THRAP10827 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.13■□□□□ 0.01
THRAP10827 INTS4P2-202ENST00000614726 2019 ntBASIC15.13■□□□□ 0.01
THRAP10827 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
THRAP10827 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms