Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
TCRAP04437 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
TCRAP04437 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.47□□□□□ -0.57
TCRAP04437 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.47□□□□□ -0.57
TCRAP04437 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 AL033527.5-202ENST00000641632 1098 ntBASIC11.47□□□□□ -0.57
TCRAP04437 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
TCRAP04437 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 TCAF1P1-201ENST00000414990 2232 ntBASIC11.47□□□□□ -0.57
TCRAP04437 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.47□□□□□ -0.57
TCRAP04437 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.47□□□□□ -0.57
TCRAP04437 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
TCRAP04437 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
TCRAP04437 AC130686.1-201ENST00000622936 2466 ntBASIC11.46□□□□□ -0.57
TCRAP04437 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
TCRAP04437 AL590627.1-203ENST00000421194 1026 ntBASIC11.46□□□□□ -0.57
TCRAP04437 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TCRAP04437 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.46□□□□□ -0.57
TCRAP04437 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC11.46□□□□□ -0.57
TCRAP04437 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TCRAP04437 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.46□□□□□ -0.57
TCRAP04437 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.46□□□□□ -0.57
TCRAP04437 AC040169.1-201ENST00000565382 521 ntBASIC11.46□□□□□ -0.57
TCRAP04437 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.46□□□□□ -0.57
TCRAP04437 AC022145.2-201ENST00000598203 171 ntBASIC11.46□□□□□ -0.57
TCRAP04437 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.46□□□□□ -0.57
TCRAP04437 LINC01115-203ENST00000606068 577 ntBASIC11.46□□□□□ -0.57
TCRAP04437 AL589739.1-201ENST00000607720 493 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms