Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.65□□□□□ -0.38
CD74P04233 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.65□□□□□ -0.38
CD74P04233 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.65□□□□□ -0.38
CD74P04233 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 MYADML-201ENST00000474610 2147 ntBASIC12.65□□□□□ -0.38
CD74P04233 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
CD74P04233 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD74P04233 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
CD74P04233 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.65□□□□□ -0.39
CD74P04233 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
CD74P04233 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CD74P04233 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.39
CD74P04233 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
CD74P04233 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CD74P04233 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.65□□□□□ -0.39
CD74P04233 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
CD74P04233 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.64□□□□□ -0.39
CD74P04233 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.64□□□□□ -0.39
CD74P04233 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 AC090643.2-201ENST00000623442 2029 ntBASIC12.64□□□□□ -0.39
CD74P04233 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CD74P04233 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.64□□□□□ -0.39
CD74P04233 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CD74P04233 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
CD74P04233 AC068760.1-201ENST00000493579 1953 ntBASIC12.64□□□□□ -0.39
CD74P04233 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CD74P04233 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.64□□□□□ -0.39
CD74P04233 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.64□□□□□ -0.39
CD74P04233 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.64□□□□□ -0.39
CD74P04233 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.64□□□□□ -0.39
CD74P04233 RNA5SP416-201ENST00000516838 111 ntBASIC12.64□□□□□ -0.39
CD74P04233 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.64□□□□□ -0.39
CD74P04233 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 AL662844.1-201ENST00000546340 181 ntBASIC12.64□□□□□ -0.39
CD74P04233 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.64□□□□□ -0.39
CD74P04233 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
CD74P04233 MIR6074-201ENST00000612054 107 ntBASIC12.64□□□□□ -0.39
CD74P04233 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.64□□□□□ -0.39
CD74P04233 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CD74P04233 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.64□□□□□ -0.39
CD74P04233 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.64□□□□□ -0.39
CD74P04233 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
CD74P04233 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 CLK3P2-201ENST00000427566 1453 ntBASIC12.64□□□□□ -0.39
CD74P04233 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CD74P04233 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
CD74P04233 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.64□□□□□ -0.39
CD74P04233 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD74P04233 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.64□□□□□ -0.39
CD74P04233 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 KRT8P14-201ENST00000414254 1442 ntBASIC12.63□□□□□ -0.39
CD74P04233 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CD74P04233 AC118758.2-201ENST00000614242 2813 ntBASIC12.63□□□□□ -0.39
CD74P04233 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CD74P04233 AC215219.1-201ENST00000400706 1817 ntBASIC12.63□□□□□ -0.39
CD74P04233 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
CD74P04233 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CD74P04233 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.63□□□□□ -0.39
CD74P04233 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CD74P04233 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CD74P04233 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD74P04233 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms