Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 AC026316.1-201ENST00000398900 414 ntBASIC16.16■□□□□ 0.18
CHRNA1P02708 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.16■□□□□ 0.18
CHRNA1P02708 FGFR3P1-201ENST00000449999 601 ntBASIC16.16■□□□□ 0.18
CHRNA1P02708 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.16■□□□□ 0.18
CHRNA1P02708 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.16■□□□□ 0.18
CHRNA1P02708 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.16■□□□□ 0.18
CHRNA1P02708 AC103691.2-201ENST00000618824 433 ntBASIC16.16■□□□□ 0.18
CHRNA1P02708 AC007718.1-201ENST00000621078 280 ntBASIC16.16■□□□□ 0.18
CHRNA1P02708 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.16■□□□□ 0.18
CHRNA1P02708 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CHRNA1P02708 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CHRNA1P02708 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHRNA1P02708 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.16■□□□□ 0.18
CHRNA1P02708 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.16■□□□□ 0.18
CHRNA1P02708 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA1P02708 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA1P02708 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CHRNA1P02708 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA1P02708 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CHRNA1P02708 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CHRNA1P02708 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.15■□□□□ 0.18
CHRNA1P02708 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA1P02708 AC253536.4-201ENST00000440539 267 ntBASIC16.15■□□□□ 0.18
CHRNA1P02708 LDHBP1-201ENST00000455730 1119 ntBASIC16.15■□□□□ 0.18
CHRNA1P02708 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA1P02708 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.15■□□□□ 0.18
CHRNA1P02708 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CHRNA1P02708 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 AC073352.2-201ENST00000609385 439 ntBASIC16.15■□□□□ 0.18
CHRNA1P02708 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CHRNA1P02708 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.15■□□□□ 0.18
CHRNA1P02708 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CHRNA1P02708 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHRNA1P02708 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.15■□□□□ 0.18
CHRNA1P02708 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CHRNA1P02708 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CHRNA1P02708 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CHRNA1P02708 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.14■□□□□ 0.17
CHRNA1P02708 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.14■□□□□ 0.17
CHRNA1P02708 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHRNA1P02708 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA1P02708 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.14■□□□□ 0.17
CHRNA1P02708 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.14■□□□□ 0.17
CHRNA1P02708 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.14■□□□□ 0.17
CHRNA1P02708 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHRNA1P02708 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.14■□□□□ 0.17
CHRNA1P02708 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.14■□□□□ 0.17
CHRNA1P02708 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHRNA1P02708 RN7SL258P-201ENST00000478664 300 ntBASIC16.14■□□□□ 0.17
CHRNA1P02708 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms