Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
NKX2-2O95096 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 BX640514.1-201ENST00000583223 1918 ntBASIC13.82□□□□□ -0.2
NKX2-2O95096 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
NKX2-2O95096 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.82□□□□□ -0.2
NKX2-2O95096 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NKX2-2O95096 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.82□□□□□ -0.2
NKX2-2O95096 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NKX2-2O95096 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NKX2-2O95096 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX2-2O95096 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 AL009178.2-201ENST00000597278 2719 ntBASIC13.81□□□□□ -0.2
NKX2-2O95096 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX2-2O95096 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX2-2O95096 INE2-201ENST00000630399 1874 ntBASIC13.81□□□□□ -0.2
NKX2-2O95096 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX2-2O95096 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NKX2-2O95096 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 AC005089.1-201ENST00000619486 2241 ntBASIC13.81□□□□□ -0.2
NKX2-2O95096 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
NKX2-2O95096 CNN2P8-201ENST00000421872 913 ntBASIC13.81□□□□□ -0.2
NKX2-2O95096 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX2-2O95096 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX2-2O95096 KRT17P7-201ENST00000451704 1104 ntBASIC13.81□□□□□ -0.2
NKX2-2O95096 AC007551.1-201ENST00000457394 519 ntBASIC13.81□□□□□ -0.2
NKX2-2O95096 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 AC106820.3-201ENST00000561653 397 ntBASIC13.81□□□□□ -0.2
NKX2-2O95096 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.81□□□□□ -0.2
NKX2-2O95096 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.81□□□□□ -0.2
NKX2-2O95096 AC244669.2-201ENST00000612320 853 ntBASIC13.81□□□□□ -0.2
NKX2-2O95096 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX2-2O95096 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX2-2O95096 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NKX2-2O95096 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NKX2-2O95096 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
NKX2-2O95096 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
NKX2-2O95096 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
NKX2-2O95096 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX2-2O95096 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX2-2O95096 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX2-2O95096 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX2-2O95096 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 AC020910.5-201ENST00000623668 1865 ntBASIC13.8□□□□□ -0.2
NKX2-2O95096 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-2O95096 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NKX2-2O95096 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-2O95096 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NKX2-2O95096 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX2-2O95096 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.8□□□□□ -0.2
NKX2-2O95096 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 RN7SKP175-201ENST00000408472 289 ntBASIC13.8□□□□□ -0.2
NKX2-2O95096 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX2-2O95096 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms