Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.05□□□□□ -0.32
CCNKO75909 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.05□□□□□ -0.32
CCNKO75909 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.05□□□□□ -0.32
CCNKO75909 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 AC093724.1-201ENST00000448659 1027 ntBASIC13.05□□□□□ -0.32
CCNKO75909 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 FAM86EP-206ENST00000510506 987 ntBASIC13.05□□□□□ -0.32
CCNKO75909 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.05□□□□□ -0.32
CCNKO75909 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.05□□□□□ -0.32
CCNKO75909 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.05□□□□□ -0.32
CCNKO75909 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CCNKO75909 AL591684.3-201ENST00000605187 298 ntBASIC13.05□□□□□ -0.32
CCNKO75909 AC066615.1-201ENST00000640911 628 ntBASIC13.05□□□□□ -0.32
CCNKO75909 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.05□□□□□ -0.32
CCNKO75909 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CCNKO75909 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.05□□□□□ -0.32
CCNKO75909 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CCNKO75909 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
CCNKO75909 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CCNKO75909 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCNKO75909 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 KHSRPP1-201ENST00000427983 1768 ntBASIC13.04□□□□□ -0.32
CCNKO75909 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 POM121L14P-201ENST00000406100 1558 ntBASIC13.04□□□□□ -0.32
CCNKO75909 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CCNKO75909 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CCNKO75909 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CCNKO75909 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CCNKO75909 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCNKO75909 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.04□□□□□ -0.32
CCNKO75909 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.04□□□□□ -0.32
CCNKO75909 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.04□□□□□ -0.32
CCNKO75909 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.04□□□□□ -0.32
CCNKO75909 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.04□□□□□ -0.32
CCNKO75909 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 MIR3180-1-201ENST00000580374 94 ntBASIC13.04□□□□□ -0.32
CCNKO75909 MIR3180-3-201ENST00000584616 94 ntBASIC13.04□□□□□ -0.32
CCNKO75909 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCNKO75909 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.04□□□□□ -0.32
CCNKO75909 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.04□□□□□ -0.32
CCNKO75909 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCNKO75909 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms