Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 CD8B2-202ENST00000417670 633 ntBASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 GOLGA2P4-201ENST00000441462 777 ntBASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 HOMER2P2-201ENST00000451621 847 ntBASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 ENPP7P14-201ENST00000621765 1040 ntBASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 MROH4P-201ENST00000431302 1578 ntBASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA2E9PIF3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA2E9PIF3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms