Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 AJ011931.1-201ENST00000618749 2492 ntBASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 NCR3-202ENST00000376071 541 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 PRKXP1-201ENST00000561423 1122 ntBASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC144AA2RUR9 TCAF2P1-201ENST00000291129 2421 ntBASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 LINC01165-201ENST00000445190 1623 ntBASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 SPCS2P2-201ENST00000603270 608 ntBASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 AC012044.1-201ENST00000603431 297 ntBASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 AC018442.1-201ENST00000421439 2061 ntBASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 AC126177.1-201ENST00000547829 2218 ntBASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC144AA2RUR9 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 MIR33B-201ENST00000385104 96 ntBASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 AC253536.4-201ENST00000440539 267 ntBASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 MAGEA5-201ENST00000446757 942 ntBASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 EEF1DP6-201ENST00000449232 372 ntBASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 STUB1-204ENST00000564370 875 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 AC006504.5-208ENST00000588784 2401 ntBASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC144AA2RUR9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms