Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 AC097493.3-201ENST00000509725 367 ntBASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 MTHFR-210ENST00000641407 2387 ntBASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
R3HCC1Q9Y3T6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 AC152010.1-201ENST00000415779 2006 ntBASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 AC011477.6-201ENST00000604980 1927 ntBASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 STK40-201ENST00000359297 4837 ntTSL 2 BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 CYP4F24P-201ENST00000586049 1580 ntBASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
R3HCC1Q9Y3T6 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 AC241585.1-201ENST00000433527 519 ntBASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 AL355385.1-201ENST00000606123 409 ntBASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 AL138828.2-201ENST00000615812 383 ntBASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 SPDYE12P-201ENST00000618416 771 ntBASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 MIR6069-201ENST00000620069 79 ntBASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
R3HCC1Q9Y3T6 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 AP001267.2-201ENST00000532619 2086 ntBASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
R3HCC1Q9Y3T6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms