Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS9D1Q9Y2B5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS9D1Q9Y2B5 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS9D1Q9Y2B5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS9D1Q9Y2B5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS9D1Q9Y2B5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS9D1Q9Y2B5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS9D1Q9Y2B5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
VPS9D1Q9Y2B5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 AL022393.1-201ENST00000625142 1677 ntBASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 MTATP6P17-201ENST00000431030 672 ntBASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 AC007041.1-201ENST00000438989 1155 ntBASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 KRT18P25-201ENST00000508931 1278 ntBASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 AC092451.2-201ENST00000538746 658 ntBASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 AC140912.1-201ENST00000577171 1054 ntBASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 SPDYE22P-201ENST00000582158 798 ntBASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 AC106881.1-201ENST00000605849 3329 ntBASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS9D1Q9Y2B5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.05■□□□□ 0
VPS9D1Q9Y2B5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
VPS9D1Q9Y2B5 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
VPS9D1Q9Y2B5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.05■□□□□ 0
VPS9D1Q9Y2B5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
VPS9D1Q9Y2B5 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VPS9D1Q9Y2B5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.05■□□□□ 0
VPS9D1Q9Y2B5 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 GIMAP3P-201ENST00000495150 836 ntBASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 DUX4L47-201ENST00000566374 394 ntBASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 AP001063.1-201ENST00000568332 529 ntBASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS9D1Q9Y2B5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms