Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.32■□□□□ 0.04
EBF1Q9UH73 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 CHMP1AP1-201ENST00000445563 662 ntBASIC15.32■□□□□ 0.04
EBF1Q9UH73 MPRIPP1-201ENST00000452433 1089 ntBASIC15.32■□□□□ 0.04
EBF1Q9UH73 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 TMEM198B-204ENST00000484016 896 ntBASIC15.32■□□□□ 0.04
EBF1Q9UH73 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
EBF1Q9UH73 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EBF1Q9UH73 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 AC127383.1-201ENST00000444697 1800 ntBASIC15.31■□□□□ 0.04
EBF1Q9UH73 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 PKD1P5-201ENST00000532415 10291 ntBASIC15.31■□□□□ 0.04
EBF1Q9UH73 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 AL354877.1-201ENST00000424412 413 ntBASIC15.31■□□□□ 0.04
EBF1Q9UH73 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 SPTLC1P5-201ENST00000450718 252 ntBASIC15.31■□□□□ 0.04
EBF1Q9UH73 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 AC022616.1-201ENST00000518688 554 ntBASIC15.31■□□□□ 0.04
EBF1Q9UH73 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 OR10B1P-201ENST00000601666 907 ntBASIC15.31■□□□□ 0.04
EBF1Q9UH73 AL023803.2-201ENST00000620080 638 ntBASIC15.31■□□□□ 0.04
EBF1Q9UH73 AC100757.4-201ENST00000626934 759 ntBASIC15.31■□□□□ 0.04
EBF1Q9UH73 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EBF1Q9UH73 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
EBF1Q9UH73 CICP14-201ENST00000629111 2732 ntBASIC15.3■□□□□ 0.04
EBF1Q9UH73 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
EBF1Q9UH73 AP003171.2-201ENST00000528208 925 ntBASIC15.3■□□□□ 0.04
EBF1Q9UH73 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.3■□□□□ 0.04
EBF1Q9UH73 MIR4706-201ENST00000582134 82 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms