Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 AC090643.2-201ENST00000623442 2029 ntBASIC14.82□□□□□ -0.04
MKS1Q9NXB0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
MKS1Q9NXB0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 AC007969.1-201ENST00000433675 447 ntBASIC14.81□□□□□ -0.04
MKS1Q9NXB0 AP006288.1-201ENST00000446065 395 ntBASIC14.81□□□□□ -0.04
MKS1Q9NXB0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 FAM86LP-201ENST00000478302 853 ntBASIC14.81□□□□□ -0.04
MKS1Q9NXB0 AC125807.1-201ENST00000483097 614 ntBASIC14.81□□□□□ -0.04
MKS1Q9NXB0 AC026434.2-201ENST00000506094 1078 ntBASIC14.81□□□□□ -0.04
MKS1Q9NXB0 AC022616.1-201ENST00000518688 554 ntBASIC14.81□□□□□ -0.04
MKS1Q9NXB0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 AC131206.1-201ENST00000538078 1211 ntBASIC14.81□□□□□ -0.04
MKS1Q9NXB0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 AC036164.1-201ENST00000570544 333 ntBASIC14.81□□□□□ -0.04
MKS1Q9NXB0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MKS1Q9NXB0 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 CNN2P11-201ENST00000429351 262 ntBASIC14.8□□□□□ -0.04
MKS1Q9NXB0 AC092580.3-201ENST00000430932 139 ntBASIC14.8□□□□□ -0.04
MKS1Q9NXB0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MKS1Q9NXB0 AC109322.1-201ENST00000524499 1264 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms