Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.4■□□□□ 0.38
BRMS1Q9HCU9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
BRMS1Q9HCU9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.39■□□□□ 0.38
BRMS1Q9HCU9 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 ACTG1P3-201ENST00000431775 1114 ntBASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 TDH-203ENST00000531764 1110 ntBASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 AC010319.3-201ENST00000597028 470 ntBASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.39■□□□□ 0.37
BRMS1Q9HCU9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 RN7SL692P-201ENST00000464677 288 ntBASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 AC018665.1-201ENST00000622927 1362 ntBASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 AC018442.1-201ENST00000421439 2061 ntBASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 AC023090.2-201ENST00000625182 2110 ntBASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.38■□□□□ 0.37
BRMS1Q9HCU9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BRMS1Q9HCU9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms