Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 AC093525.8-201ENST00000624099 1342 ntBASIC16.79■□□□□ 0.28
CBX8Q9HC52 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 AC051619.7-201ENST00000568314 623 ntBASIC16.79■□□□□ 0.28
CBX8Q9HC52 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 TCAM1P-207ENST00000485295 1537 ntBASIC16.79■□□□□ 0.28
CBX8Q9HC52 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CBX8Q9HC52 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CBX8Q9HC52 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 AL158070.2-201ENST00000623713 1621 ntBASIC16.78■□□□□ 0.28
CBX8Q9HC52 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 FAM90A12P-201ENST00000519497 2375 ntBASIC16.78■□□□□ 0.28
CBX8Q9HC52 FAM90A24P-201ENST00000520792 2369 ntBASIC16.78■□□□□ 0.28
CBX8Q9HC52 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CBX8Q9HC52 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CBX8Q9HC52 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX8Q9HC52 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CBX8Q9HC52 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CBX8Q9HC52 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CBX8Q9HC52 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX8Q9HC52 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.77■□□□□ 0.28
CBX8Q9HC52 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX8Q9HC52 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CBX8Q9HC52 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CBX8Q9HC52 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CBX8Q9HC52 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CBX8Q9HC52 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CBX8Q9HC52 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CBX8Q9HC52 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.77■□□□□ 0.28
CBX8Q9HC52 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms