Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 AC015910.1-201ENST00000579400 975 ntBASIC13.22□□□□□ -0.29
ELL3Q9HB65 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 AL033527.5-202ENST00000641632 1098 ntBASIC13.22□□□□□ -0.29
ELL3Q9HB65 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 AP000845.1-201ENST00000581677 2131 ntBASIC13.22□□□□□ -0.29
ELL3Q9HB65 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 LINC01230-201ENST00000625222 3017 ntBASIC13.22□□□□□ -0.29
ELL3Q9HB65 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 REXO1L2P-201ENST00000425429 2069 ntBASIC13.22□□□□□ -0.29
ELL3Q9HB65 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ELL3Q9HB65 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.22□□□□□ -0.29
ELL3Q9HB65 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 AL359258.3-201ENST00000622910 2331 ntBASIC13.21□□□□□ -0.29
ELL3Q9HB65 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 GHSR-202ENST00000427970 912 ntBASIC13.21□□□□□ -0.29
ELL3Q9HB65 AC055876.3-201ENST00000431496 288 ntBASIC13.21□□□□□ -0.29
ELL3Q9HB65 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 RN7SL618P-201ENST00000477850 296 ntBASIC13.21□□□□□ -0.29
ELL3Q9HB65 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 AC138649.4-201ENST00000612222 287 ntBASIC13.21□□□□□ -0.29
ELL3Q9HB65 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.21□□□□□ -0.29
ELL3Q9HB65 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ELL3Q9HB65 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ELL3Q9HB65 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.21□□□□□ -0.3
ELL3Q9HB65 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
ELL3Q9HB65 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.21□□□□□ -0.3
ELL3Q9HB65 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
ELL3Q9HB65 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ELL3Q9HB65 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms